Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1LQ96KA5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 PCDHA1-201ENST00000378133 2726 ntBASIC17.27■□□□□ 0.35
CLPTM1LQ96KA5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 LINC00304-203ENST00000565008 1864 ntBASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1LQ96KA5 AC009102.3-201ENST00000623118 1491 ntBASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AC083906.2-201ENST00000511578 360 ntBASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 IKBKGP1-201ENST00000612193 1073 ntBASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 AC034236.2-201ENST00000606662 1610 ntBASIC17.25■□□□□ 0.35
CLPTM1LQ96KA5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms