Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 AKR1C7P-201ENST00000305623 895 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 MINOS1P3-201ENST00000457048 203 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 RN7SL606P-201ENST00000472779 293 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 Z69720.1-201ENST00000601483 472 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 AC104581.1-202ENST00000635932 2618 ntBASIC17.33■□□□□ 0.36
RNF31Q96EP0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SDHAP2-201ENST00000455183 2001 ntBASIC17.32■□□□□ 0.36
RNF31Q96EP0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 IGHV3-47-201ENST00000425060 335 ntBASIC17.32■□□□□ 0.36
RNF31Q96EP0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF31Q96EP0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF31Q96EP0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.31■□□□□ 0.36
RNF31Q96EP0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 AC126763.1-201ENST00000552015 2118 ntBASIC17.31■□□□□ 0.36
RNF31Q96EP0 AC104692.2-201ENST00000603054 253 ntBASIC17.31■□□□□ 0.36
RNF31Q96EP0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF31Q96EP0 AC009102.3-201ENST00000623118 1491 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms