Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 STK25P1-201ENST00000585406 838 ntBASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 REXO1L3P-201ENST00000622202 1288 ntBASIC12□□□□□ -0.49
ALMS1Q8TCU4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 FO538757.1-201ENST00000623083 1397 ntBASIC12□□□□□ -0.49
ALMS1Q8TCU4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 OR8S1-201ENST00000310194 1080 ntBASIC12□□□□□ -0.49
ALMS1Q8TCU4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12□□□□□ -0.49
ALMS1Q8TCU4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
ALMS1Q8TCU4 TBC1D3P5-201ENST00000579401 1545 ntBASIC12□□□□□ -0.49
ALMS1Q8TCU4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 AC092919.2-201ENST00000623631 1645 ntBASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms