Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 FEM1AP4-201ENST00000443167 1987 ntBASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 CKMT2-AS1-201ENST00000500148 2224 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AC005921.3-201ENST00000623774 2151 ntBASIC11.19□□□□□ -0.62
SVIPQ8NHG7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AC023830.2-201ENST00000563704 1662 ntBASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.19□□□□□ -0.62
SVIPQ8NHG7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.18□□□□□ -0.62
SVIPQ8NHG7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms