Protein–RNA interactions for Protein: Q6UWP8

SBSN, Suprabasin, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSNQ6UWP8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 AL355312.1-201ENST00000407115 2176 ntBASIC17.52■□□□□ 0.4
SBSNQ6UWP8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 GPR32P1-201ENST00000601788 811 ntBASIC17.52■□□□□ 0.4
SBSNQ6UWP8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SBSNQ6UWP8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SBSNQ6UWP8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SBSNQ6UWP8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SBSNQ6UWP8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 AC009949.1-201ENST00000623048 1830 ntBASIC17.51■□□□□ 0.39
SBSNQ6UWP8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 TSPY12P-201ENST00000421279 868 ntBASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.51■□□□□ 0.39
SBSNQ6UWP8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 AL353692.3-201ENST00000407031 1396 ntBASIC17.51■□□□□ 0.39
SBSNQ6UWP8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 AC138932.1-201ENST00000534164 6830 ntBASIC17.51■□□□□ 0.39
SBSNQ6UWP8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SBSNQ6UWP8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 TMPOP1-202ENST00000424642 1267 ntBASIC17.5■□□□□ 0.39
SBSNQ6UWP8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 RNF126P1-202ENST00000569893 925 ntBASIC17.5■□□□□ 0.39
SBSNQ6UWP8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
SBSNQ6UWP8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.49■□□□□ 0.39
SBSNQ6UWP8 AC005332.3-201ENST00000589904 676 ntBASIC17.49■□□□□ 0.39
SBSNQ6UWP8 AL390719.2-201ENST00000606993 987 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms