Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.3■■□□□ 1
CTR9Q6PD62 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.3■■□□□ 1
CTR9Q6PD62 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.3■■□□□ 1
CTR9Q6PD62 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.3■■□□□ 1
CTR9Q6PD62 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.3■■□□□ 1
CTR9Q6PD62 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.3■■□□□ 1
CTR9Q6PD62 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.3■■□□□ 1
CTR9Q6PD62 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.3■■□□□ 1
CTR9Q6PD62 REXO1L9P-201ENST00000604264 2108 ntBASIC21.3■■□□□ 1
CTR9Q6PD62 AC114341.1-201ENST00000618070 349 ntBASIC21.3■■□□□ 1
CTR9Q6PD62 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 KRT8P47-201ENST00000604727 1398 ntBASIC21.3■■□□□ 1
CTR9Q6PD62 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.3■■□□□ 1
CTR9Q6PD62 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTR9Q6PD62 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.29■■□□□ 1
CTR9Q6PD62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.29■■□□□ 1
CTR9Q6PD62 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CTR9Q6PD62 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CTR9Q6PD62 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.29■■□□□ 1
CTR9Q6PD62 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CTR9Q6PD62 AC009533.2-201ENST00000543664 586 ntBASIC21.29■■□□□ 1
CTR9Q6PD62 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.29■■□□□ 1
CTR9Q6PD62 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.29■■□□□ 1
CTR9Q6PD62 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.29■■□□□ 1
CTR9Q6PD62 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTR9Q6PD62 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.28■■□□□ 1
CTR9Q6PD62 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 AKR1C7P-201ENST00000305623 895 ntBASIC21.28■■□□□ 1
CTR9Q6PD62 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CTR9Q6PD62 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.28■■□□□ 1
CTR9Q6PD62 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.28■■□□□ 1
CTR9Q6PD62 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 AC020916.1-201ENST00000587762 1774 ntBASIC21.28■■□□□ 1
CTR9Q6PD62 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.28■■□□□ 1
CTR9Q6PD62 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.28■■□□□ 1
CTR9Q6PD62 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTR9Q6PD62 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CTR9Q6PD62 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CTR9Q6PD62 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.27■■□□□ 1
CTR9Q6PD62 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CTR9Q6PD62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.27■■□□□ 1
CTR9Q6PD62 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 AC011467.2-201ENST00000598425 242 ntBASIC21.27■■□□□ 1
CTR9Q6PD62 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.27■■□□□ 1
CTR9Q6PD62 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTR9Q6PD62 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms