Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CMC4P56277 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.38□□□□□ -0.27
CMC4P56277 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.38□□□□□ -0.27
CMC4P56277 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.38□□□□□ -0.27
CMC4P56277 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.38□□□□□ -0.27
CMC4P56277 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.38□□□□□ -0.27
CMC4P56277 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.38□□□□□ -0.27
CMC4P56277 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.38□□□□□ -0.27
CMC4P56277 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CMC4P56277 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.38□□□□□ -0.27
CMC4P56277 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.37□□□□□ -0.27
CMC4P56277 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.37□□□□□ -0.27
CMC4P56277 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 AC009533.2-201ENST00000543664 586 ntBASIC13.37□□□□□ -0.27
CMC4P56277 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.37□□□□□ -0.27
CMC4P56277 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.37□□□□□ -0.27
CMC4P56277 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CMC4P56277 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CMC4P56277 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.37□□□□□ -0.27
CMC4P56277 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 POM121L3P-201ENST00000419331 1163 ntBASIC13.36□□□□□ -0.27
CMC4P56277 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CMC4P56277 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.36□□□□□ -0.27
CMC4P56277 AC104819.1-201ENST00000504587 486 ntBASIC13.36□□□□□ -0.27
CMC4P56277 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.36□□□□□ -0.27
CMC4P56277 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CMC4P56277 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.36□□□□□ -0.27
CMC4P56277 AL353801.3-201ENST00000609898 542 ntBASIC13.36□□□□□ -0.27
CMC4P56277 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 AC093458.2-201ENST00000623150 629 ntBASIC13.36□□□□□ -0.27
CMC4P56277 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms