Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC6A12P48065 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC6A12P48065 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC6A12P48065 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A12P48065 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A12P48065 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A12P48065 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC6A12P48065 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC6A12P48065 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC6A12P48065 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
SLC6A12P48065 AL645929.1-201ENST00000420084 975 ntBASIC17.33■□□□□ 0.36
SLC6A12P48065 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC6A12P48065 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC6A12P48065 DDX43P3-201ENST00000441064 443 ntBASIC17.33■□□□□ 0.36
SLC6A12P48065 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC6A12P48065 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC6A12P48065 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC6A12P48065 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC6A12P48065 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC6A12P48065 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SLC6A12P48065 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SLC6A12P48065 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 AL355312.1-201ENST00000407115 2176 ntBASIC17.33■□□□□ 0.36
SLC6A12P48065 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC6A12P48065 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC6A12P48065 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC6A12P48065 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC6A12P48065 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC6A12P48065 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A12P48065 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC6A12P48065 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC6A12P48065 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC6A12P48065 MTCL1P1-201ENST00000446207 792 ntBASIC17.32■□□□□ 0.36
SLC6A12P48065 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC6A12P48065 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC6A12P48065 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 AL136038.3-201ENST00000561909 1096 ntBASIC17.32■□□□□ 0.36
SLC6A12P48065 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A12P48065 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A12P48065 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC6A12P48065 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 AL031133.1-201ENST00000406807 723 ntBASIC17.31■□□□□ 0.36
SLC6A12P48065 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC6A12P48065 FAM210CP-201ENST00000445714 574 ntBASIC17.31■□□□□ 0.36
SLC6A12P48065 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC6A12P48065 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC6A12P48065 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC6A12P48065 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A12P48065 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 LINC00304-203ENST00000565008 1864 ntBASIC17.31■□□□□ 0.36
SLC6A12P48065 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A12P48065 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms