Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
HNF4AP41235 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
HNF4AP41235 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.45■□□□□ 0.38
HNF4AP41235 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.45■□□□□ 0.38
HNF4AP41235 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HNF4AP41235 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HNF4AP41235 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.45■□□□□ 0.38
HNF4AP41235 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HNF4AP41235 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HNF4AP41235 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HNF4AP41235 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HNF4AP41235 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HNF4AP41235 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.44■□□□□ 0.38
HNF4AP41235 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.44■□□□□ 0.38
HNF4AP41235 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.44■□□□□ 0.38
HNF4AP41235 AC024563.2-201ENST00000603282 481 ntBASIC17.44■□□□□ 0.38
HNF4AP41235 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 AL391807.1-203ENST00000604392 2365 ntBASIC17.44■□□□□ 0.38
HNF4AP41235 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.44■□□□□ 0.38
HNF4AP41235 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HNF4AP41235 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HNF4AP41235 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HNF4AP41235 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HNF4AP41235 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HNF4AP41235 AC132938.6-201ENST00000623828 1655 ntBASIC17.43■□□□□ 0.38
HNF4AP41235 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.43■□□□□ 0.38
HNF4AP41235 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.43■□□□□ 0.38
HNF4AP41235 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.43■□□□□ 0.38
HNF4AP41235 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 LINC01238-205ENST00000567549 1107 ntBASIC17.43■□□□□ 0.38
HNF4AP41235 NTF6B-201ENST00000591913 560 ntBASIC17.43■□□□□ 0.38
HNF4AP41235 AL136038.4-201ENST00000603606 1261 ntBASIC17.43■□□□□ 0.38
HNF4AP41235 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.43■□□□□ 0.38
HNF4AP41235 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HNF4AP41235 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.43■□□□□ 0.38
HNF4AP41235 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HNF4AP41235 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.43■□□□□ 0.38
HNF4AP41235 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 AC022898.2-201ENST00000616822 1312 ntBASIC17.43■□□□□ 0.38
HNF4AP41235 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HNF4AP41235 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HNF4AP41235 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HNF4AP41235 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HNF4AP41235 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HNF4AP41235 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HNF4AP41235 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HNF4AP41235 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HNF4AP41235 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms