Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 AC020763.4-201ENST00000623414 4170 ntBASIC15.17■□□□□ 0.02
COL8A2P25067 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.16■□□□□ 0.02
COL8A2P25067 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.16■□□□□ 0.02
COL8A2P25067 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.16■□□□□ 0.02
COL8A2P25067 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL8A2P25067 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
COL8A2P25067 AC079781.3-201ENST00000449110 356 ntBASIC15.16■□□□□ 0.02
COL8A2P25067 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.16■□□□□ 0.02
COL8A2P25067 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.16■□□□□ 0.02
COL8A2P25067 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.16■□□□□ 0.02
COL8A2P25067 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.16■□□□□ 0.02
COL8A2P25067 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.16■□□□□ 0.02
COL8A2P25067 AL591684.3-201ENST00000605187 298 ntBASIC15.16■□□□□ 0.02
COL8A2P25067 AL031008.1-201ENST00000619963 541 ntBASIC15.16■□□□□ 0.02
COL8A2P25067 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL8A2P25067 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL8A2P25067 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.16■□□□□ 0.02
COL8A2P25067 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL8A2P25067 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL8A2P25067 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 RCN1P2-201ENST00000398357 915 ntBASIC15.15■□□□□ 0.02
COL8A2P25067 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.15■□□□□ 0.02
COL8A2P25067 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.15■□□□□ 0.02
COL8A2P25067 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 AC096582.2-201ENST00000510860 516 ntBASIC15.15■□□□□ 0.02
COL8A2P25067 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.15■□□□□ 0.02
COL8A2P25067 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
COL8A2P25067 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.15■□□□□ 0.02
COL8A2P25067 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 PHGDH-209ENST00000641074 1780 ntBASIC15.15■□□□□ 0.02
COL8A2P25067 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
COL8A2P25067 AC132938.6-201ENST00000623828 1655 ntBASIC15.15■□□□□ 0.02
COL8A2P25067 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
COL8A2P25067 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL8A2P25067 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.14■□□□□ 0.01
COL8A2P25067 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
COL8A2P25067 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.14■□□□□ 0.01
COL8A2P25067 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.14■□□□□ 0.01
COL8A2P25067 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms