Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AL499627.1-201ENST00000569373 2188 ntBASIC14.77□□□□□ -0.05
SCAF4O95104 AC011676.5-201ENST00000624864 2660 ntBASIC14.77□□□□□ -0.05
SCAF4O95104 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.77□□□□□ -0.05
SCAF4O95104 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SCAF4O95104 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SCAF4O95104 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.76□□□□□ -0.05
SCAF4O95104 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
SCAF4O95104 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SCAF4O95104 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 GMCL1P1-201ENST00000463439 1581 ntBASIC14.76□□□□□ -0.05
SCAF4O95104 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SCAF4O95104 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SCAF4O95104 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SCAF4O95104 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
SCAF4O95104 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 KRT16P5-201ENST00000455284 522 ntBASIC14.75□□□□□ -0.05
SCAF4O95104 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.75□□□□□ -0.05
SCAF4O95104 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAF4O95104 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SCAF4O95104 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
SCAF4O95104 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAF4O95104 AC022211.2-201ENST00000585075 2527 ntBASIC14.74□□□□□ -0.05
SCAF4O95104 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.74□□□□□ -0.05
SCAF4O95104 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 REXO1L9P-201ENST00000604264 2108 ntBASIC14.74□□□□□ -0.05
SCAF4O95104 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.74□□□□□ -0.05
SCAF4O95104 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.74□□□□□ -0.05
SCAF4O95104 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 AC066615.1-201ENST00000640911 628 ntBASIC14.74□□□□□ -0.05
SCAF4O95104 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.74□□□□□ -0.05
SCAF4O95104 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms