Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.55■□□□□ 0.4
PEX1O43933 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PEX1O43933 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.55■□□□□ 0.4
PEX1O43933 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.55■□□□□ 0.4
PEX1O43933 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 INGX-201ENST00000359239 846 ntBASIC17.55■□□□□ 0.4
PEX1O43933 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 SLC25A1P2-201ENST00000430693 912 ntBASIC17.55■□□□□ 0.4
PEX1O43933 CCR12P-201ENST00000446203 998 ntBASIC17.55■□□□□ 0.4
PEX1O43933 ATP5G1P1-201ENST00000448724 379 ntBASIC17.55■□□□□ 0.4
PEX1O43933 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.55■□□□□ 0.4
PEX1O43933 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.55■□□□□ 0.4
PEX1O43933 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
PEX1O43933 AL499627.1-201ENST00000569373 2188 ntBASIC17.55■□□□□ 0.4
PEX1O43933 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PEX1O43933 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.54■□□□□ 0.4
PEX1O43933 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PEX1O43933 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.54■□□□□ 0.4
PEX1O43933 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.54■□□□□ 0.4
PEX1O43933 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.54■□□□□ 0.4
PEX1O43933 AC010203.1-204ENST00000548782 407 ntBASIC17.54■□□□□ 0.4
PEX1O43933 AL049597.2-201ENST00000565575 961 ntBASIC17.54■□□□□ 0.4
PEX1O43933 MYC-208ENST00000641036 567 ntBASIC17.54■□□□□ 0.4
PEX1O43933 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PEX1O43933 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.54■□□□□ 0.4
PEX1O43933 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.54■□□□□ 0.4
PEX1O43933 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.54■□□□□ 0.4
PEX1O43933 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.54■□□□□ 0.4
PEX1O43933 AC073508.3-201ENST00000619697 1419 ntBASIC17.54■□□□□ 0.4
PEX1O43933 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.54■□□□□ 0.4
PEX1O43933 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PEX1O43933 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 AC046158.3-201ENST00000624947 2558 ntBASIC17.53■□□□□ 0.4
PEX1O43933 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 REXO1L9P-201ENST00000604264 2108 ntBASIC17.53■□□□□ 0.4
PEX1O43933 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PEX1O43933 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PEX1O43933 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PEX1O43933 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.53■□□□□ 0.4
PEX1O43933 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.53■□□□□ 0.4
PEX1O43933 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.53■□□□□ 0.4
PEX1O43933 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.53■□□□□ 0.4
PEX1O43933 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
PEX1O43933 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PEX1O43933 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
PEX1O43933 AP001094.4-201ENST00000579008 2176 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms