Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDELR3O43731 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KDELR3O43731 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KDELR3O43731 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KDELR3O43731 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 AC096633.1-201ENST00000422446 749 ntBASIC18.21■□□□□ 0.51
KDELR3O43731 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.21■□□□□ 0.51
KDELR3O43731 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.21■□□□□ 0.51
KDELR3O43731 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.21■□□□□ 0.51
KDELR3O43731 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.21■□□□□ 0.51
KDELR3O43731 CLEC4GP1-201ENST00000596555 870 ntBASIC18.21■□□□□ 0.51
KDELR3O43731 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 AC099336.1-202ENST00000602961 463 ntBASIC18.21■□□□□ 0.51
KDELR3O43731 AC116407.2-201ENST00000613639 860 ntBASIC18.21■□□□□ 0.51
KDELR3O43731 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.21■□□□□ 0.51
KDELR3O43731 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.21■□□□□ 0.51
KDELR3O43731 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.21■□□□□ 0.51
KDELR3O43731 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDELR3O43731 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
KDELR3O43731 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
KDELR3O43731 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KDELR3O43731 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.2■□□□□ 0.5
KDELR3O43731 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
KDELR3O43731 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.2■□□□□ 0.5
KDELR3O43731 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.2■□□□□ 0.5
KDELR3O43731 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.2■□□□□ 0.5
KDELR3O43731 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.2■□□□□ 0.5
KDELR3O43731 AC009533.2-201ENST00000543664 586 ntBASIC18.2■□□□□ 0.5
KDELR3O43731 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.2■□□□□ 0.5
KDELR3O43731 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.2■□□□□ 0.5
KDELR3O43731 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.2■□□□□ 0.5
KDELR3O43731 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
KDELR3O43731 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDELR3O43731 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KDELR3O43731 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KDELR3O43731 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.19■□□□□ 0.5
KDELR3O43731 POM121L3P-201ENST00000419331 1163 ntBASIC18.19■□□□□ 0.5
KDELR3O43731 SLC25A6P5-201ENST00000435663 894 ntBASIC18.19■□□□□ 0.5
KDELR3O43731 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.19■□□□□ 0.5
KDELR3O43731 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms