Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
NDUFS4O43181 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFS4O43181 NOC2LP2-201ENST00000407594 1944 ntBASIC17.23■□□□□ 0.35
NDUFS4O43181 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFS4O43181 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFS4O43181 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NDUFS4O43181 AC091076.1-201ENST00000610741 619 ntBASIC17.23■□□□□ 0.35
NDUFS4O43181 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.23■□□□□ 0.35
NDUFS4O43181 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFS4O43181 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NDUFS4O43181 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFS4O43181 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
NDUFS4O43181 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NDUFS4O43181 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 KRT18P65-201ENST00000439811 1286 ntBASIC17.22■□□□□ 0.35
NDUFS4O43181 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 BX276092.5-203ENST00000456199 560 ntBASIC17.22■□□□□ 0.35
NDUFS4O43181 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.22■□□□□ 0.35
NDUFS4O43181 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFS4O43181 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFS4O43181 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NDUFS4O43181 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFS4O43181 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFS4O43181 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFS4O43181 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NDUFS4O43181 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDUFS4O43181 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NDUFS4O43181 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.21■□□□□ 0.35
NDUFS4O43181 DUTP2-201ENST00000519164 463 ntBASIC17.21■□□□□ 0.35
NDUFS4O43181 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 KRT8P26-201ENST00000534154 1276 ntBASIC17.21■□□□□ 0.35
NDUFS4O43181 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.21■□□□□ 0.35
NDUFS4O43181 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NDUFS4O43181 AL121672.3-201ENST00000608644 468 ntBASIC17.21■□□□□ 0.35
NDUFS4O43181 AC009154.2-201ENST00000621177 724 ntBASIC17.21■□□□□ 0.35
NDUFS4O43181 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.21■□□□□ 0.35
NDUFS4O43181 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFS4O43181 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFS4O43181 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
NDUFS4O43181 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFS4O43181 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDUFS4O43181 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFS4O43181 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NDUFS4O43181 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.2■□□□□ 0.34
NDUFS4O43181 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.2■□□□□ 0.34
NDUFS4O43181 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFS4O43181 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFS4O43181 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms