Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19■□□□□ 0.63
SOX1O00570 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19■□□□□ 0.63
SOX1O00570 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19■□□□□ 0.63
SOX1O00570 DDX43P3-201ENST00000441064 443 ntBASIC19■□□□□ 0.63
SOX1O00570 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19■□□□□ 0.63
SOX1O00570 GATB-205ENST00000508611 605 ntTSL 2 BASIC19■□□□□ 0.63
SOX1O00570 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19■□□□□ 0.63
SOX1O00570 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SOX1O00570 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19■□□□□ 0.63
SOX1O00570 MED16-214ENST00000617672 554 ntTSL 5 BASIC19■□□□□ 0.63
SOX1O00570 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19■□□□□ 0.63
SOX1O00570 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19■□□□□ 0.63
SOX1O00570 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SOX1O00570 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 NCF1C-201ENST00000438382 1427 ntBASIC19■□□□□ 0.63
SOX1O00570 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.99■□□□□ 0.63
SOX1O00570 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.99■□□□□ 0.63
SOX1O00570 PIN1P1-201ENST00000412108 996 ntBASIC18.99■□□□□ 0.63
SOX1O00570 FAM58DP-201ENST00000428076 619 ntBASIC18.99■□□□□ 0.63
SOX1O00570 RPS2P32-201ENST00000439199 892 ntBASIC18.99■□□□□ 0.63
SOX1O00570 AL512638.1-201ENST00000457493 794 ntBASIC18.99■□□□□ 0.63
SOX1O00570 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.99■□□□□ 0.63
SOX1O00570 KRT8P48-201ENST00000515599 1220 ntBASIC18.99■□□□□ 0.63
SOX1O00570 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.99■□□□□ 0.63
SOX1O00570 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.99■□□□□ 0.63
SOX1O00570 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX1O00570 AL805961.1-202ENST00000641562 540 ntBASIC18.99■□□□□ 0.63
SOX1O00570 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SOX1O00570 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
SOX1O00570 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SOX1O00570 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SOX1O00570 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX1O00570 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX1O00570 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.98■□□□□ 0.63
SOX1O00570 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.98■□□□□ 0.63
SOX1O00570 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX1O00570 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.98■□□□□ 0.63
SOX1O00570 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX1O00570 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX1O00570 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX1O00570 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX1O00570 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX1O00570 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX1O00570 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SOX1O00570 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX1O00570 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.97■□□□□ 0.63
SOX1O00570 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SOX1O00570 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SOX1O00570 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SOX1O00570 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 AC148477.5-201ENST00000625164 1645 ntBASIC18.97■□□□□ 0.63
SOX1O00570 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.97■□□□□ 0.63
SOX1O00570 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.97■□□□□ 0.63
SOX1O00570 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX1O00570 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.97■□□□□ 0.63
SOX1O00570 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.97■□□□□ 0.63
SOX1O00570 AC140878.1-201ENST00000565277 250 ntBASIC18.97■□□□□ 0.63
SOX1O00570 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms