Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 CICP14-201ENST00000629111 2732 ntBASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 OR2I1P-208ENST00000641137 4948 ntBASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHKB-CPT1BH3BT56 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 AL121761.2-201ENST00000598007 1648 ntBASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 AL122018.1-201ENST00000446607 2310 ntBASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms