Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COLCA2A8K830 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
COLCA2A8K830 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COLCA2A8K830 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.8□□□□□ -0.2
COLCA2A8K830 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.79□□□□□ -0.2
COLCA2A8K830 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.79□□□□□ -0.2
COLCA2A8K830 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.79□□□□□ -0.2
COLCA2A8K830 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 CICP14-201ENST00000629111 2732 ntBASIC13.79□□□□□ -0.2
COLCA2A8K830 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.79□□□□□ -0.2
COLCA2A8K830 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COLCA2A8K830 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.79□□□□□ -0.2
COLCA2A8K830 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.78□□□□□ -0.2
COLCA2A8K830 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 LINC00304-203ENST00000565008 1864 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.78□□□□□ -0.2
COLCA2A8K830 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.78□□□□□ -0.2
COLCA2A8K830 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.78□□□□□ -0.2
COLCA2A8K830 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 TSPY21P-201ENST00000433481 731 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.78□□□□□ -0.2
COLCA2A8K830 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.78□□□□□ -0.2
COLCA2A8K830 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.78□□□□□ -0.2
COLCA2A8K830 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.78□□□□□ -0.2
COLCA2A8K830 MIR6724-1-201ENST00000616420 92 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 MIR6724-2-201ENST00000616483 92 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 MIR6724-4-201ENST00000617390 92 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 MIR6724-3-201ENST00000622482 92 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 AC092364.2-201ENST00000596710 2692 ntBASIC13.78□□□□□ -0.2
COLCA2A8K830 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COLCA2A8K830 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.78□□□□□ -0.2
COLCA2A8K830 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms