Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 KRT8P11-201ENST00000409686 1436 ntBASIC12.8□□□□□ -0.36
LINC01549A6NIU2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 BX276092.2-201ENST00000417668 665 ntBASIC12.8□□□□□ -0.36
LINC01549A6NIU2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 AC034236.2-201ENST00000606662 1610 ntBASIC12.8□□□□□ -0.36
LINC01549A6NIU2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 AC092368.3-202ENST00000574180 1591 ntBASIC12.79□□□□□ -0.36
LINC01549A6NIU2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 AC009065.1-201ENST00000564055 1225 ntBASIC12.79□□□□□ -0.36
LINC01549A6NIU2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 LINC01126-201ENST00000623515 1646 ntBASIC12.79□□□□□ -0.36
LINC01549A6NIU2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 UBALD1-205ENST00000590891 2641 ntBASIC12.79□□□□□ -0.36
LINC01549A6NIU2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01549A6NIU2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01549A6NIU2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms