Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC008687.5-201ENST00000593746 558 ntBASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC135776.1-201ENST00000319817 2481 ntBASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 AC093677.2-201ENST00000600169 1863 ntBASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DRB4X5D2U9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 KRT18P57-201ENST00000443599 1254 ntBASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 AL157888.1-201ENST00000631930 593 ntBASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DRB4X5D2U9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 AC099343.3-201ENST00000605834 2503 ntBASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PVRIG2P-201ENST00000435460 978 ntBASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 YBX1P2-201ENST00000489612 999 ntBASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms