Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 AL136038.4-201ENST00000603606 1261 ntBASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 AC139887.4-201ENST00000607877 719 ntBASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 AC073508.3-201ENST00000619697 1419 ntBASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP46A1Q9Y6A2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 KRT89P-201ENST00000620027 1478 ntBASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 YBX1P2-201ENST00000489612 999 ntBASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CYP46A1Q9Y6A2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 STARP1-201ENST00000397973 869 ntBASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 SPDYE15P-201ENST00000424157 909 ntBASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
CYP46A1Q9Y6A2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 AC005521.1-201ENST00000393351 872 ntBASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.33■■□□□ 1.01
CYP46A1Q9Y6A2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms