Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.62■□□□□ 0.57
HAPLN3Q96S86 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HAPLN3Q96S86 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HAPLN3Q96S86 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 AL353801.3-201ENST00000609898 542 ntBASIC18.61■□□□□ 0.57
HAPLN3Q96S86 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HAPLN3Q96S86 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 UPK3BP1-201ENST00000428678 509 ntBASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ATP5G2P1-201ENST00000433580 426 ntBASIC18.6■□□□□ 0.57
HAPLN3Q96S86 AP002383.4-201ENST00000442518 975 ntBASIC18.6■□□□□ 0.57
HAPLN3Q96S86 AC112698.1-201ENST00000510299 916 ntBASIC18.6■□□□□ 0.57
HAPLN3Q96S86 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 NOC2LP2-201ENST00000407594 1944 ntBASIC18.6■□□□□ 0.57
HAPLN3Q96S86 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.6■□□□□ 0.57
HAPLN3Q96S86 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 SLC25A6P5-201ENST00000435663 894 ntBASIC18.59■□□□□ 0.57
HAPLN3Q96S86 DRAXINP1-201ENST00000437611 948 ntBASIC18.59■□□□□ 0.57
HAPLN3Q96S86 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms