Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 DDX43P3-201ENST00000441064 443 ntBASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 ZNF444P1-201ENST00000559497 298 ntBASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM5Q96HC4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.58■□□□□ 0.41
PDLIM5Q96HC4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.58■□□□□ 0.41
PDLIM5Q96HC4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 TSPY12P-201ENST00000421279 868 ntBASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 AC112907.2-201ENST00000448639 330 ntBASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PDLIM5Q96HC4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 AL353692.3-201ENST00000407031 1396 ntBASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 AL359075.1-203ENST00000462729 1002 ntBASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 GPR32P1-201ENST00000601788 811 ntBASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM5Q96HC4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 KRT8P47-201ENST00000604727 1398 ntBASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 AC092647.4-201ENST00000457211 535 ntBASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 AC112698.1-201ENST00000510299 916 ntBASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM5Q96HC4 LINC01311-201ENST00000565162 1445 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms