Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 COX5BP2-201ENST00000392354 334 ntBASIC22.91■■□□□ 1.26
SMARCC1Q92922 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 MKNK2P1-201ENST00000437526 628 ntBASIC22.91■■□□□ 1.26
SMARCC1Q92922 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC1Q92922 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC1Q92922 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 AC006504.4-201ENST00000592118 1568 ntBASIC22.9■■□□□ 1.26
SMARCC1Q92922 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 HTR5BP-201ENST00000430851 1154 ntBASIC22.9■■□□□ 1.26
SMARCC1Q92922 PRSS29P-201ENST00000440800 595 ntBASIC22.9■■□□□ 1.26
SMARCC1Q92922 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 HCG4B-203ENST00000450128 991 ntBASIC22.9■■□□□ 1.26
SMARCC1Q92922 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 AC108073.2-201ENST00000464002 357 ntBASIC22.9■■□□□ 1.26
SMARCC1Q92922 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.9■■□□□ 1.26
SMARCC1Q92922 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMARCC1Q92922 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
SMARCC1Q92922 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.89■■□□□ 1.26
SMARCC1Q92922 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SMARCC1Q92922 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.89■■□□□ 1.26
SMARCC1Q92922 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.89■■□□□ 1.26
SMARCC1Q92922 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
SMARCC1Q92922 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 CNN2P11-201ENST00000429351 262 ntBASIC22.89■■□□□ 1.25
SMARCC1Q92922 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 MIR4751-201ENST00000578027 74 ntBASIC22.89■■□□□ 1.25
SMARCC1Q92922 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC1Q92922 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC1Q92922 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC1Q92922 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.89■■□□□ 1.25
SMARCC1Q92922 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC1Q92922 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMARCC1Q92922 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC1Q92922 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC1Q92922 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 IGHV3-65-201ENST00000523210 341 ntBASIC22.88■■□□□ 1.25
SMARCC1Q92922 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 AC008667.4-201ENST00000607370 168 ntBASIC22.88■■□□□ 1.25
SMARCC1Q92922 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC1Q92922 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC1Q92922 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.88■■□□□ 1.25
SMARCC1Q92922 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMARCC1Q92922 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.87■■□□□ 1.25
SMARCC1Q92922 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMARCC1Q92922 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SMARCC1Q92922 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.87■■□□□ 1.25
SMARCC1Q92922 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.87■■□□□ 1.25
SMARCC1Q92922 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms