Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ZNRF4Q8WWF5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 LINC00167-201ENST00000530583 1419 ntBASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 NAPSB-206ENST00000562112 1266 ntBASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 AP006294.2-201ENST00000641667 209 ntBASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNRF4Q8WWF5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 AC009053.2-201ENST00000563701 2365 ntBASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 MMP23A-201ENST00000234610 1017 ntBASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 MIR3917-201ENST00000580971 93 ntBASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 AL157888.1-201ENST00000631930 593 ntBASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 SIRPAP1-201ENST00000448467 1770 ntBASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNRF4Q8WWF5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms