Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PMFBP1Q8TBY8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AC004832.2-201ENST00000426397 482 ntBASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 AL020996.1-203ENST00000536896 2307 ntBASIC24.66■■□□□ 1.54
PMFBP1Q8TBY8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 AC079776.2-201ENST00000641154 1609 ntBASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PMFBP1Q8TBY8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 DNAJB3-202ENST00000449667 1266 ntBASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 LINC02084-201ENST00000606069 1096 ntBASIC24.64■■□□□ 1.54
PMFBP1Q8TBY8 AC132938.6-201ENST00000623828 1655 ntBASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PMFBP1Q8TBY8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PMFBP1Q8TBY8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms