Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 BCL11A-204ENST00000359629 2427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 LINC00857-201ENST00000422847 2161 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 AL499627.1-201ENST00000569373 2188 ntBASIC11.22□□□□□ -0.61
SVIPQ8NHG7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 AL354861.3-201ENST00000600140 2412 ntBASIC11.21□□□□□ -0.61
SVIPQ8NHG7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.21□□□□□ -0.61
SVIPQ8NHG7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 AC008764.6-201ENST00000595909 2069 ntBASIC11.21□□□□□ -0.62
SVIPQ8NHG7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
SVIPQ8NHG7 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SVIPQ8NHG7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms