RNA–Protein interactions for RNA: ENST00000281701.10

NVL-201, Transcript of nuclear VCP-like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NVL, Length 3,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-201ENST00000281701 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
NVL-201ENST00000281701 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
NVL-201ENST00000281701 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
NVL-201ENST00000281701 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
NVL-201ENST00000281701 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
NVL-201ENST00000281701 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
NVL-201ENST00000281701 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
NVL-201ENST00000281701 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
NVL-201ENST00000281701 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
NVL-201ENST00000281701 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
NVL-201ENST00000281701 ABCC9O60706 1549 aa20.03■□□□□ 0.8
NVL-201ENST00000281701 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
NVL-201ENST00000281701 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
NVL-201ENST00000281701 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
NVL-201ENST00000281701 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
NVL-201ENST00000281701 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
NVL-201ENST00000281701 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
NVL-201ENST00000281701 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
NVL-201ENST00000281701 HRCP23327 699 aa19.58■□□□□ 0.73
NVL-201ENST00000281701 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
NVL-201ENST00000281701 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
NVL-201ENST00000281701 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
NVL-201ENST00000281701 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
NVL-201ENST00000281701 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
NVL-201ENST00000281701 NACADO15069 1562 aa19.29■□□□□ 0.68
NVL-201ENST00000281701 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
NVL-201ENST00000281701 WIZO95785 1651 aa19.25■□□□□ 0.67
NVL-201ENST00000281701 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
NVL-201ENST00000281701 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
NVL-201ENST00000281701 ABCC8Q09428 1581 aa18.96■□□□□ 0.62
NVL-201ENST00000281701 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
NVL-201ENST00000281701 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
NVL-201ENST00000281701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.62
NVL-201ENST00000281701 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
NVL-201ENST00000281701 SOGA1O94964 1423 aa18.81■□□□□ 0.6
NVL-201ENST00000281701 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
NVL-201ENST00000281701 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
NVL-201ENST00000281701 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
NVL-201ENST00000281701 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
NVL-201ENST00000281701 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
NVL-201ENST00000281701 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
NVL-201ENST00000281701 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
NVL-201ENST00000281701 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
NVL-201ENST00000281701 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
NVL-201ENST00000281701 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
NVL-201ENST00000281701 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
NVL-201ENST00000281701 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
NVL-201ENST00000281701 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
NVL-201ENST00000281701 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
NVL-201ENST00000281701 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
NVL-201ENST00000281701 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
NVL-201ENST00000281701 APLP2Q06481 763 aa18.4■□□□□ 0.54
NVL-201ENST00000281701 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
NVL-201ENST00000281701 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
NVL-201ENST00000281701 CLIP1P30622 1438 aa18.27■□□□□ 0.52
NVL-201ENST00000281701 RAPGEF2Q9Y4G8 1499 aa18.27■□□□□ 0.52
NVL-201ENST00000281701 ITGAEP38570 1179 aa18.25■□□□□ 0.51
NVL-201ENST00000281701 EEA1Q15075 1411 aa18.24■□□□□ 0.51
NVL-201ENST00000281701 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
NVL-201ENST00000281701 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
NVL-201ENST00000281701 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
NVL-201ENST00000281701 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
NVL-201ENST00000281701 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
NVL-201ENST00000281701 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
NVL-201ENST00000281701 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
NVL-201ENST00000281701 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
NVL-201ENST00000281701 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
NVL-201ENST00000281701 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
NVL-201ENST00000281701 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
NVL-201ENST00000281701 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
NVL-201ENST00000281701 CUX1P39880 1505 aa17.97■□□□□ 0.47
NVL-201ENST00000281701 KIF21BO75037 1637 aa17.97■□□□□ 0.47
NVL-201ENST00000281701 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
NVL-201ENST00000281701 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
NVL-201ENST00000281701 CUX2O14529 1486 aa17.91■□□□□ 0.46
NVL-201ENST00000281701 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
NVL-201ENST00000281701 MIER1Q8N108 512 aa17.9■□□□□ 0.46
NVL-201ENST00000281701 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
NVL-201ENST00000281701 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
NVL-201ENST00000281701 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
NVL-201ENST00000281701 CFTRP13569 1480 aa17.86■□□□□ 0.45
NVL-201ENST00000281701 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
NVL-201ENST00000281701 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
NVL-201ENST00000281701 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
NVL-201ENST00000281701 CENPBP07199 599 aaPredicted RBP17.82■□□□□ 0.44
NVL-201ENST00000281701 IGF1RP08069 1367 aa17.81■□□□□ 0.44
NVL-201ENST00000281701 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
NVL-201ENST00000281701 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
NVL-201ENST00000281701 NESP48681 1621 aa17.77■□□□□ 0.44
NVL-201ENST00000281701 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
NVL-201ENST00000281701 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
NVL-201ENST00000281701 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
NVL-201ENST00000281701 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
NVL-201ENST00000281701 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
NVL-201ENST00000281701 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
NVL-201ENST00000281701 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
NVL-201ENST00000281701 HIRIP3Q9BW71 556 aaPredicted RBP17.68■□□□□ 0.42
NVL-201ENST00000281701 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
NVL-201ENST00000281701 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
NVL-201ENST00000281701 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms