Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX5Q8N196 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX5Q8N196 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX5Q8N196 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX5Q8N196 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX5Q8N196 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.39■□□□□ 0.53
SIX5Q8N196 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SIX5Q8N196 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SIX5Q8N196 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SIX5Q8N196 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.38■□□□□ 0.53
SIX5Q8N196 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX5Q8N196 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIX5Q8N196 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIX5Q8N196 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX5Q8N196 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SIX5Q8N196 AC092364.2-202ENST00000597012 1073 ntBASIC18.38■□□□□ 0.53
SIX5Q8N196 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.38■□□□□ 0.53
SIX5Q8N196 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 AC097374.2-201ENST00000618617 1306 ntBASIC18.38■□□□□ 0.53
SIX5Q8N196 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX5Q8N196 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX5Q8N196 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX5Q8N196 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 AL024508.2-201ENST00000607749 1894 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 MCCD1P2-201ENST00000423228 335 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 HTR5BP-201ENST00000430851 1154 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 BX005266.1-201ENST00000473402 457 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 MIR4469-201ENST00000583919 79 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 AC005593.1-201ENST00000624894 515 ntBASIC18.37■□□□□ 0.53
SIX5Q8N196 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX5Q8N196 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SIX5Q8N196 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX5Q8N196 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SIX5Q8N196 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SIX5Q8N196 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.36■□□□□ 0.53
SIX5Q8N196 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIX5Q8N196 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms