Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 AC093010.1-201ENST00000473625 1624 ntBASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 AL591684.3-201ENST00000605187 298 ntBASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 AC135776.1-201ENST00000319817 2481 ntBASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.95■□□□□ 0.62
SCN4BQ8IWT1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 RCN1P2-201ENST00000398357 915 ntBASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 FAAHP1-202ENST00000446499 1238 ntBASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 MIR5100-201ENST00000579544 119 ntBASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 TP73-AS1-210ENST00000637775 1455 ntBASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN4BQ8IWT1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 AL096828.2-201ENST00000567259 1965 ntBASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 AC114341.1-201ENST00000618070 349 ntBASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 AC104581.1-202ENST00000635932 2618 ntBASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.93■□□□□ 0.62
SCN4BQ8IWT1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms