Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 UNC93B7-201ENST00000509439 705 ntBASIC14.78□□□□□ -0.04
TREML4Q6UXN2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 NEK4P2-201ENST00000580004 1012 ntBASIC14.78□□□□□ -0.04
TREML4Q6UXN2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.78□□□□□ -0.04
TREML4Q6UXN2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TREML4Q6UXN2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TREML4Q6UXN2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 KATNBL1P2-201ENST00000433311 835 ntBASIC14.77□□□□□ -0.05
TREML4Q6UXN2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 AC009078.2-202ENST00000463353 338 ntBASIC14.77□□□□□ -0.05
TREML4Q6UXN2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TREML4Q6UXN2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AL645929.1-201ENST00000420084 975 ntBASIC14.76□□□□□ -0.05
TREML4Q6UXN2 TSSC2-201ENST00000450217 709 ntBASIC14.76□□□□□ -0.05
TREML4Q6UXN2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 Z85996.1-201ENST00000494644 937 ntBASIC14.76□□□□□ -0.05
TREML4Q6UXN2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 GCSHP2-201ENST00000560971 527 ntBASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TREML4Q6UXN2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms