Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NALT1-201ENST00000429224 738 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 FAM45BP-202ENST00000592932 1624 ntBASIC9.08□□□□□ -0.96
LINC01554Q52M75 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LINC01554Q52M75 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01554Q52M75 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 KRT16P2-201ENST00000414673 1423 ntBASIC9.07□□□□□ -0.96
LINC01554Q52M75 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CICP24-201ENST00000605464 2705 ntBASIC9.07□□□□□ -0.96
LINC01554Q52M75 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 GATB-213ENST00000515812 1893 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MIR2861-201ENST00000636310 90 ntBASIC9.07□□□□□ -0.96
LINC01554Q52M75 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01554Q52M75 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01554Q52M75 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.07□□□□□ -0.96
LINC01554Q52M75 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms