Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 AC104076.2-201ENST00000448912 469 ntBASIC17.08■□□□□ 0.32
RAE1P78406 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RAE1P78406 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
RAE1P78406 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAE1P78406 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.07■□□□□ 0.32
RAE1P78406 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
RAE1P78406 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 MIR662-201ENST00000384847 95 ntBASIC17.07■□□□□ 0.32
RAE1P78406 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAE1P78406 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 AK4P3-201ENST00000418260 669 ntBASIC17.07■□□□□ 0.32
RAE1P78406 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAE1P78406 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.07■□□□□ 0.32
RAE1P78406 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.07■□□□□ 0.32
RAE1P78406 AL359075.1-203ENST00000462729 1002 ntBASIC17.07■□□□□ 0.32
RAE1P78406 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAE1P78406 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAE1P78406 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 AC009949.1-201ENST00000623048 1830 ntBASIC17.07■□□□□ 0.32
RAE1P78406 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAE1P78406 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.07■□□□□ 0.32
RAE1P78406 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAE1P78406 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 AC139713.2-201ENST00000641328 2723 ntBASIC17.06■□□□□ 0.32
RAE1P78406 AL645608.8-201ENST00000606034 2086 ntBASIC17.06■□□□□ 0.32
RAE1P78406 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
RAE1P78406 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 FAM8A6P-201ENST00000407496 1135 ntBASIC17.06■□□□□ 0.32
RAE1P78406 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.06■□□□□ 0.32
RAE1P78406 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.06■□□□□ 0.32
RAE1P78406 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.06■□□□□ 0.32
RAE1P78406 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.06■□□□□ 0.32
RAE1P78406 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.06■□□□□ 0.32
RAE1P78406 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
RAE1P78406 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
RAE1P78406 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.06■□□□□ 0.32
RAE1P78406 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAE1P78406 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.05■□□□□ 0.32
RAE1P78406 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAE1P78406 IGHGP-201ENST00000390555 1178 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms