Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.78■□□□□ 0.28
PSMD4P55036 ZNF444P1-201ENST00000559497 298 ntBASIC16.78■□□□□ 0.28
PSMD4P55036 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 AC020916.1-201ENST00000587762 1774 ntBASIC16.78■□□□□ 0.28
PSMD4P55036 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
PSMD4P55036 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PSMD4P55036 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PSMD4P55036 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PSMD4P55036 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PSMD4P55036 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.77■□□□□ 0.28
PSMD4P55036 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.77■□□□□ 0.28
PSMD4P55036 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.77■□□□□ 0.28
PSMD4P55036 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.77■□□□□ 0.28
PSMD4P55036 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.77■□□□□ 0.28
PSMD4P55036 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.77■□□□□ 0.28
PSMD4P55036 AC079602.3-201ENST00000623931 403 ntBASIC16.77■□□□□ 0.28
PSMD4P55036 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PSMD4P55036 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.77■□□□□ 0.28
PSMD4P55036 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PSMD4P55036 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PSMD4P55036 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.77■□□□□ 0.27
PSMD4P55036 LINC01311-201ENST00000565162 1445 ntBASIC16.77■□□□□ 0.27
PSMD4P55036 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PSMD4P55036 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.77■□□□□ 0.27
PSMD4P55036 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.27
PSMD4P55036 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PSMD4P55036 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 HBZP1-201ENST00000354915 429 ntBASIC16.76■□□□□ 0.27
PSMD4P55036 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.76■□□□□ 0.27
PSMD4P55036 AL671277.2-201ENST00000458060 996 ntBASIC16.76■□□□□ 0.27
PSMD4P55036 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.76■□□□□ 0.27
PSMD4P55036 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.76■□□□□ 0.27
PSMD4P55036 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.76■□□□□ 0.27
PSMD4P55036 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PSMD4P55036 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PSMD4P55036 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms