Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.71■□□□□ 0.11
GDNFP39905 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.71■□□□□ 0.11
GDNFP39905 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
GDNFP39905 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
GDNFP39905 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GDNFP39905 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.71■□□□□ 0.1
GDNFP39905 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GDNFP39905 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GDNFP39905 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
GDNFP39905 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 OR6D1P-203ENST00000641209 4860 ntBASIC15.7■□□□□ 0.1
GDNFP39905 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GDNFP39905 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 AC011506.1-201ENST00000474329 610 ntBASIC15.7■□□□□ 0.1
GDNFP39905 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GDNFP39905 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 CD177P1-201ENST00000606252 935 ntBASIC15.7■□□□□ 0.1
GDNFP39905 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.7■□□□□ 0.1
GDNFP39905 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.7■□□□□ 0.1
GDNFP39905 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.7■□□□□ 0.1
GDNFP39905 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GDNFP39905 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
GDNFP39905 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDNFP39905 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.69■□□□□ 0.1
GDNFP39905 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GDNFP39905 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.69■□□□□ 0.1
GDNFP39905 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GDNFP39905 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 MESTP1-201ENST00000404287 994 ntBASIC15.69■□□□□ 0.1
GDNFP39905 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.69■□□□□ 0.1
GDNFP39905 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.69■□□□□ 0.1
GDNFP39905 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
GDNFP39905 AC233702.5-201ENST00000584107 538 ntBASIC15.69■□□□□ 0.1
GDNFP39905 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 PHGDH-209ENST00000641074 1780 ntBASIC15.69■□□□□ 0.1
GDNFP39905 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms