Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.71■□□□□ 0.59
SCNN1AP37088 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SCNN1AP37088 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.71■□□□□ 0.59
SCNN1AP37088 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCNN1AP37088 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SCNN1AP37088 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SCNN1AP37088 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.7■□□□□ 0.58
SCNN1AP37088 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCNN1AP37088 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SCNN1AP37088 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 AP002383.4-201ENST00000442518 975 ntBASIC18.7■□□□□ 0.58
SCNN1AP37088 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.7■□□□□ 0.58
SCNN1AP37088 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
SCNN1AP37088 AC011840.4-201ENST00000578471 627 ntBASIC18.7■□□□□ 0.58
SCNN1AP37088 AC069148.1-201ENST00000608741 768 ntBASIC18.7■□□□□ 0.58
SCNN1AP37088 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.7■□□□□ 0.58
SCNN1AP37088 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCNN1AP37088 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCNN1AP37088 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.7■□□□□ 0.58
SCNN1AP37088 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SCNN1AP37088 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCNN1AP37088 VENTXP7-201ENST00000475503 772 ntBASIC18.69■□□□□ 0.58
SCNN1AP37088 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.69■□□□□ 0.58
SCNN1AP37088 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.69■□□□□ 0.58
SCNN1AP37088 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 AC009949.1-201ENST00000623048 1830 ntBASIC18.69■□□□□ 0.58
SCNN1AP37088 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
SCNN1AP37088 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCNN1AP37088 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 AC125634.1-201ENST00000438758 1403 ntBASIC18.68■□□□□ 0.58
SCNN1AP37088 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 ATP5G2P1-201ENST00000433580 426 ntBASIC18.68■□□□□ 0.58
SCNN1AP37088 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.68■□□□□ 0.58
SCNN1AP37088 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.68■□□□□ 0.58
SCNN1AP37088 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.68■□□□□ 0.58
SCNN1AP37088 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 AL138831.2-201ENST00000606564 490 ntBASIC18.68■□□□□ 0.58
SCNN1AP37088 NPAP1P7-201ENST00000613027 823 ntBASIC18.68■□□□□ 0.58
SCNN1AP37088 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.68■□□□□ 0.58
SCNN1AP37088 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCNN1AP37088 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.68■□□□□ 0.58
SCNN1AP37088 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
SCNN1AP37088 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCNN1AP37088 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCNN1AP37088 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCNN1AP37088 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCNN1AP37088 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
SCNN1AP37088 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCNN1AP37088 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms