Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VARSP26640 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.72■□□□□ 0.43
VARSP26640 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 AL031133.1-201ENST00000406807 723 ntBASIC17.72■□□□□ 0.43
VARSP26640 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VARSP26640 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.72■□□□□ 0.43
VARSP26640 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VARSP26640 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 YBX1P2-201ENST00000489612 999 ntBASIC17.71■□□□□ 0.43
VARSP26640 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.71■□□□□ 0.43
VARSP26640 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 AC139887.4-201ENST00000607877 719 ntBASIC17.71■□□□□ 0.43
VARSP26640 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.71■□□□□ 0.43
VARSP26640 AL023973.1-201ENST00000624619 620 ntBASIC17.71■□□□□ 0.43
VARSP26640 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
VARSP26640 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VARSP26640 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VARSP26640 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARSP26640 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VARSP26640 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.71■□□□□ 0.42
VARSP26640 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.71■□□□□ 0.42
VARSP26640 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.71■□□□□ 0.42
VARSP26640 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VARSP26640 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 KRT18P48-201ENST00000434763 852 ntBASIC17.7■□□□□ 0.42
VARSP26640 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VARSP26640 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.7■□□□□ 0.42
VARSP26640 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 AC138028.4-201ENST00000564984 1845 ntBASIC17.7■□□□□ 0.42
VARSP26640 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms