Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RTCAO00442 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.19■□□□□ 0.34
RTCAO00442 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.19■□□□□ 0.34
RTCAO00442 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.19■□□□□ 0.34
RTCAO00442 AC100803.2-201ENST00000562459 1963 ntBASIC17.19■□□□□ 0.34
RTCAO00442 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.19■□□□□ 0.34
RTCAO00442 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTCAO00442 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.19■□□□□ 0.34
RTCAO00442 AP003733.1-201ENST00000491725 852 ntBASIC17.19■□□□□ 0.34
RTCAO00442 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.19■□□□□ 0.34
RTCAO00442 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.19■□□□□ 0.34
RTCAO00442 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTCAO00442 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.19■□□□□ 0.34
RTCAO00442 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.19■□□□□ 0.34
RTCAO00442 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTCAO00442 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
RTCAO00442 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 KRT89P-201ENST00000620027 1478 ntBASIC17.18■□□□□ 0.34
RTCAO00442 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.18■□□□□ 0.34
RTCAO00442 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 AC113404.2-201ENST00000507884 177 ntBASIC17.18■□□□□ 0.34
RTCAO00442 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.18■□□□□ 0.34
RTCAO00442 RNF126P1-202ENST00000569893 925 ntBASIC17.18■□□□□ 0.34
RTCAO00442 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.18■□□□□ 0.34
RTCAO00442 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.18■□□□□ 0.34
RTCAO00442 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 AC012317.2-201ENST00000623305 2251 ntBASIC17.18■□□□□ 0.34
RTCAO00442 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
RTCAO00442 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTCAO00442 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.18■□□□□ 0.34
RTCAO00442 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RTCAO00442 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RTCAO00442 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RTCAO00442 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 IGHGP-201ENST00000390555 1178 ntBASIC17.17■□□□□ 0.34
RTCAO00442 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.17■□□□□ 0.34
RTCAO00442 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.17■□□□□ 0.34
RTCAO00442 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 AC134043.2-201ENST00000624206 2238 ntBASIC17.17■□□□□ 0.34
RTCAO00442 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.17■□□□□ 0.34
RTCAO00442 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTCAO00442 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTCAO00442 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.16■□□□□ 0.34
RTCAO00442 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RTCAO00442 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTCAO00442 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTCAO00442 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms