Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
DDX39AO00148 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX39AO00148 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX39AO00148 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.23■□□□□ 0.83
DDX39AO00148 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DDX39AO00148 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX39AO00148 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX39AO00148 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX39AO00148 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX39AO00148 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX39AO00148 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX39AO00148 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
DDX39AO00148 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX39AO00148 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.22■□□□□ 0.83
DDX39AO00148 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX39AO00148 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX39AO00148 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX39AO00148 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DDX39AO00148 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.22■□□□□ 0.83
DDX39AO00148 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX39AO00148 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX39AO00148 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX39AO00148 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX39AO00148 EMBP1-201ENST00000458200 901 ntBASIC20.21■□□□□ 0.83
DDX39AO00148 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX39AO00148 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX39AO00148 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DDX39AO00148 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX39AO00148 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
DDX39AO00148 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX39AO00148 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX39AO00148 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
DDX39AO00148 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.2■□□□□ 0.83
DDX39AO00148 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX39AO00148 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DDX39AO00148 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DDX39AO00148 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX39AO00148 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX39AO00148 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms