Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 RPS2-202ENST00000526522 924 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 FP475955.4-201ENST00000623131 1990 ntBASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 AC141586.3-201ENST00000562166 1838 ntBASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 AL512353.2-201ENST00000448759 1962 ntBASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CHKB-CPT1BH3BT56 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 PPP1R26P4-201ENST00000619065 3527 ntBASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 AL162741.1-201ENST00000565563 1558 ntBASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 AP001271.2-201ENST00000624018 1556 ntBASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC9.98□□□□□ -0.81
CHKB-CPT1BH3BT56 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms