Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC034236.2-201ENST00000606662 1610 ntBASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 AP003071.4-201ENST00000562276 1284 ntBASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIR3180-5-201ENST00000583743 153 ntBASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC108860.2-201ENST00000562760 2183 ntBASIC17.38■□□□□ 0.37
RNF103-CHMP3A0A140T963 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 AP005242.2-201ENST00000580065 1175 ntBASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIR4674-201ENST00000582457 87 ntBASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 NFIC-211ENST00000641145 8399 ntBASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF103-CHMP3A0A140T963 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms