Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV4A0A0C4DH28 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV4A0A0C4DH28 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV4A0A0C4DH28 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 AL137013.1-201ENST00000432946 1228 ntBASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 AC008687.5-201ENST00000593746 558 ntBASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 AL031432.5-201ENST00000641059 760 ntBASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV4A0A0C4DH28 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV4A0A0C4DH28 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SEC1P-202ENST00000473944 940 ntBASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV4A0A0C4DH28 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV4A0A0C4DH28 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms