Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC009102.3-201ENST00000623118 1491 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 COX11P1-201ENST00000489116 835 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC141257.4-201ENST00000634557 245 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC136944.6-201ENST00000634818 245 ntBASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB3Q9Y5G1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 AC104390.1-201ENST00000555663 520 ntBASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB3Q9Y5G1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms