Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 AL136038.4-201ENST00000603606 1261 ntBASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 AL732292.2-201ENST00000609649 430 ntBASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 AC007613.1-201ENST00000572811 2597 ntBASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 KRT18P1-202ENST00000452408 1331 ntBASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FNDC3AQ9Y2H6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 AC010240.3-201ENST00000607688 395 ntBASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FNDC3AQ9Y2H6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 FZD10-202ENST00000539839 3282 ntBASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 AP000593.1-201ENST00000393668 712 ntBASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 TSPY22P-201ENST00000427496 604 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms