Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 KRT18P27-201ENST00000427733 1299 ntBASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 MIR1199-201ENST00000621445 119 ntBASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRMT13Q9NUP7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AC073621.1-201ENST00000392730 636 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AC064836.3-201ENST00000607928 673 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AC073592.4-201ENST00000623827 446 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AC079781.4-201ENST00000641908 219 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 ESPNP-201ENST00000270691 2015 ntBASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.68■□□□□ 0.74
TRMT13Q9NUP7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.67■□□□□ 0.74
TRMT13Q9NUP7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms