Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 AC026366.1-201ENST00000488803 879 ntBASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 AL023875.1-201ENST00000640777 796 ntBASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.72■□□□□ 0.11
C12orf4Q9NQ89 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 RNA5SP413-201ENST00000516373 109 ntBASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C12orf4Q9NQ89 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C12orf4Q9NQ89 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
C12orf4Q9NQ89 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.71■□□□□ 0.1
C12orf4Q9NQ89 TSPY26P-202ENST00000565928 3884 ntBASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 AC233263.1-201ENST00000578059 224 ntBASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C12orf4Q9NQ89 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms