Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1G1Q9HCP0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 AC010460.3-201ENST00000511359 1579 ntBASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1G1Q9HCP0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 RN7SL510P-201ENST00000581311 263 ntBASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 AL591684.3-201ENST00000605187 298 ntBASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 AL691432.3-201ENST00000621860 400 ntBASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1G1Q9HCP0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms