Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 AC007950.2-201ENST00000615045 2347 ntBASIC16.99■□□□□ 0.31
NR1H4Q96RI1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 AL162412.1-201ENST00000567129 965 ntBASIC16.99■□□□□ 0.31
NR1H4Q96RI1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 AC011767.1-201ENST00000617410 1153 ntBASIC16.99■□□□□ 0.31
NR1H4Q96RI1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NR1H4Q96RI1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 MYLKP1-201ENST00000509077 1580 ntBASIC16.98■□□□□ 0.31
NR1H4Q96RI1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 PHGDH-209ENST00000641074 1780 ntBASIC16.98■□□□□ 0.31
NR1H4Q96RI1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 AC007322.4-201ENST00000509611 723 ntBASIC16.98■□□□□ 0.31
NR1H4Q96RI1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.98■□□□□ 0.31
NR1H4Q96RI1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H4Q96RI1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 KRT18P68-201ENST00000392293 1000 ntBASIC16.97■□□□□ 0.31
NR1H4Q96RI1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 AL357033.4-201ENST00000617703 1807 ntBASIC16.97■□□□□ 0.31
NR1H4Q96RI1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms