Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 TSPY19P-201ENST00000418461 509 ntBASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 TSPY18P-201ENST00000441642 509 ntBASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 AC096582.2-201ENST00000510860 516 ntBASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 BICD1-207ENST00000551848 1962 ntBASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 AC125634.1-201ENST00000438758 1403 ntBASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 NUS1P2-201ENST00000417358 873 ntBASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 POM121L3P-201ENST00000419331 1163 ntBASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 KRT8P47-201ENST00000604727 1398 ntBASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCD1Q96GM5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 KRT18P31-201ENST00000506277 1292 ntBASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 AC009533.2-201ENST00000543664 586 ntBASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 AC111152.3-201ENST00000569699 673 ntBASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ABALON-201ENST00000629058 1903 ntBASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMARCD1Q96GM5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms