Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 FITM1-202ENST00000559294 800 ntBASIC18.22■□□□□ 0.51
CDKL2Q92772 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKL2Q92772 Z99916.2-201ENST00000604037 246 ntBASIC18.22■□□□□ 0.51
CDKL2Q92772 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL2Q92772 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CDKL2Q92772 AC010653.2-201ENST00000623505 997 ntBASIC18.22■□□□□ 0.51
CDKL2Q92772 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKL2Q92772 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDKL2Q92772 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKL2Q92772 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKL2Q92772 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKL2Q92772 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL2Q92772 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CDKL2Q92772 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDKL2Q92772 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDKL2Q92772 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 AC007663.1-201ENST00000438948 1240 ntBASIC18.21■□□□□ 0.51
CDKL2Q92772 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.21■□□□□ 0.51
CDKL2Q92772 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDKL2Q92772 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKL2Q92772 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 AC008687.5-201ENST00000593746 558 ntBASIC18.21■□□□□ 0.51
CDKL2Q92772 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.21■□□□□ 0.51
CDKL2Q92772 AC010240.3-201ENST00000607688 395 ntBASIC18.21■□□□□ 0.51
CDKL2Q92772 AP000525.1-201ENST00000608286 694 ntBASIC18.21■□□□□ 0.51
CDKL2Q92772 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDKL2Q92772 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL2Q92772 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDKL2Q92772 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL2Q92772 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CDKL2Q92772 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKL2Q92772 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKL2Q92772 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKL2Q92772 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 DUTP2-201ENST00000519164 463 ntBASIC18.2■□□□□ 0.5
CDKL2Q92772 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.2■□□□□ 0.5
CDKL2Q92772 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL2Q92772 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL2Q92772 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL2Q92772 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKL2Q92772 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKL2Q92772 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKL2Q92772 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDKL2Q92772 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKL2Q92772 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDKL2Q92772 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDKL2Q92772 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CDKL2Q92772 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKL2Q92772 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKL2Q92772 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL2Q92772 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL2Q92772 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL2Q92772 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms