Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 TOB2P1-201ENST00000469761 992 ntBASIC17.04■□□□□ 0.32
TM9SF4Q92544 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 TPSP2-201ENST00000561760 610 ntBASIC17.04■□□□□ 0.32
TM9SF4Q92544 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 IFNL4P1-201ENST00000607083 540 ntBASIC17.04■□□□□ 0.32
TM9SF4Q92544 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.04■□□□□ 0.32
TM9SF4Q92544 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TSPY19P-201ENST00000418461 509 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TSPY18P-201ENST00000441642 509 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 VENTXP7-201ENST00000475503 772 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 Z69720.1-201ENST00000601483 472 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 FEM1AP3-201ENST00000403722 1741 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 KRT8P10-201ENST00000450021 1447 ntBASIC17.03■□□□□ 0.32
TM9SF4Q92544 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF4Q92544 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF4Q92544 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 ABALON-201ENST00000629058 1903 ntBASIC17.02■□□□□ 0.32
TM9SF4Q92544 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 AC005332.3-201ENST00000589904 676 ntBASIC17.02■□□□□ 0.32
TM9SF4Q92544 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF4Q92544 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF4Q92544 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TM9SF4Q92544 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TM9SF4Q92544 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TM9SF4Q92544 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF4Q92544 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms